Plenary Talks

Keynote Session 1

Title: Computational and AI-Driven Design of Random Heteropolymers as Protein Mimics

Dr. Haiyan Huang

Dr. Haiyan Huang

Professor, University of California, Berkeley

Bio: Haiyan Huang received her BS in Mathematics at Peking University in 1997, her PhD in Applied Mathematics at the University of Southern California in 2001. She did postdoc at Harvard University from 2001-2003. She is currently a Professor in the Department of Statistics at UC Berkeley. She served as Chair of the Statistics Department from July 2022 to June 2025, and as Director of the Center for Computational Biology at UC Berkeley from July 2019 to June 2022. She is a Fellow of the American Statistical Association (ASA) and the Institute of Mathematical Statistics (IMS).

Abstract

Synthetic random heteropolymers (RHPs), composed of a predefined set of monomers, offer a promising strategy for creating protein mimicking materials with tailored biochemical functions. When designed appropriately, RHPs can replicate protein behavior, enabling applications in drug delivery, therapeutic protein stabilization, biosensing, tissue engineering, and medical diagnostics. However, designing RHPs that achieve specific biological functions in a time- and cost-effective manner remains a major challenge. In this talk, I will review this problem and discuss several successful efforts we have made to address it, using statistical, computational, and AI approaches. These include a generalized semi-hidden markov model (GSHMM) and a modified variational autoencoder (VAE) within a semi-supervised framework, designed to capture the structures of critical chemical features as well as individual RHP sequence patterns. These studies highlight the potential of computational approaches to accelerate the rational design of RHPs for a wide range of biological, medical, and healthcare applications.

DahShu 2025 Contact

For all general questions about the symposium, including program details, registration, and logistics:

Email: dahshu2025@gmail.com


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